Installation
Step 1: Set up a python environment
Step 2: Install pytorch
Step 3: Install deepspeed (optional)
Step 4: Install descope and dependencies
Datasets
scRNA-seq
scATAC-seq
Tutorials
Tips
Evaluation Metrics Calculation for Single-Cell Perturbation Prediction
API
Tokenizer
descope.tokenizer
Dataset
descope.dataset
Trainer
descope.trainer
Inference
descope.inference
Utils
descope.utils
Logging
descope.logging
Arguments
descope.arguments
Acknowledgements
descope
Overview: module code
All modules for which code is available
descope.arguments
descope.dataset
descope.inference
descope.logging
descope.tokenizer
descope.trainer
descope.utils