Installation
Step 1: Set up a python environment
Step 2: Install pytorch
Step 3: Install deepspeed (optional)
Step 4: Install descope and dependencies
Datasets
scRNA-seq
scATAC-seq
Tutorials
Tips
Evaluation Metrics Calculation for Single-Cell Perturbation Prediction
API
Tokenizer
descope.tokenizer
Dataset
descope.dataset
Trainer
descope.trainer
Inference
descope.inference
Utils
descope.utils
Logging
descope.logging
Arguments
descope.arguments
Acknowledgements
descope
API
API
Tokenizer
descope.tokenizer
Dataset
descope.dataset
Trainer
descope.trainer
Inference
descope.inference
Utils
descope.utils
Logging
descope.logging
Arguments
descope.arguments